Qgis from Application:Geo repo not working

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1

Hi,

I am trying to install Qgis on OPenSUSE 15.0.

I use the repo Application:Geo (https://download.opensuse.org/repositories/Application:/Geo/openSUSE_Leap_15.0/)

After adding the repo i have an error when i try to install it :

Adding the repo (works well):
zypper ar https://download.opensuse.org/repositories/Application:/Geo/openSUSE_Leap_15.0 Application:Geo

zypper --gpg-auto-import-keys refresh

Installation :
zypper in qgis

Loading repository data...

Reading installed packages...
Resolving package dependencies...



Problem: nothing provides libm.so.6(GLIBC_2.29)(64bit) needed by qgis-3.8.0-5.6.x86_64
 Solution 1: do not install qgis-3.8.0-5.6.x86_64

 Solution 2: break qgis-3.8.0-5.6.x86_64 by ignoring some of its dependencies



Choose from above solutions by number or cancel [1/2/c] (c):
2

Hi
Likely you have other non standard repositories active (I suspect you have Tumbleweed repositories active, not a good idea) and have pulled in a later version of glibc at some point?

The version from the Geo repository was built with libm.so.6(GLIBC_2.2.5)(64bit) 2.29 is Tumbleweed.

Can you show the output from;


zypper lr -d
zypper se -si glibc
3 

zypper lr -d
Repository priorities are without effect. All enabled repositories share the same priority.

#  | Alias                                | Name                                         | Enabled | GPG Check | Refresh | Priority | Type   | URI                                                                                         | Service
---+--------------------------------------+----------------------------------------------+---------+-----------+---------+----------+--------+---------------------------------------------------------------------------------------------+--------
 1 | Application:Geo                      | Application:Geo                              | Yes     | (r ) Yes  | No      |   99     | rpm-md | https://download.opensuse.org/repositories/Application:/Geo/openSUSE_Leap_15.0              |
 2 | R-base                               | R-base                                       | Yes     | (r ) Yes  | Yes     |   99     | rpm-md | http://download.opensuse.org/repositories/devel:/languages:/R:/released/openSUSE_Leap_15.0/ |
 3 | Vlc                                  | Vlc                                          | Yes     | (r ) Yes  | Yes     |   99     | rpm-md | http://download.videolan.org/pub/vlc/SuSE/Leap_15.0/                                        |
 4 | devel:languages:perl                 | devel:languages:perl                         | Yes     | (r ) Yes  | Yes     |   99     | rpm-md | http://download.opensuse.org/repositories/devel:/languages:/perl/openSUSE_Leap_15.0/        |
 5 | flash                                | flash                                        | Yes     | (r ) Yes  | Yes     |   99     | rpm-md | http://download.opensuse.org/repositories/home:/winski/openSUSE_Leap_15.0/                  |
 6 | https-download.opensuse.org-74d84c65 | Non OSS Updates                              | Yes     | (r ) Yes  | Yes     |   99     | rpm-md | https://download.opensuse.org/update/leap/15.0/non-oss/                                     |
 7 | https-download.opensuse.org-9c37690f | OSS Updates                                  | Yes     | (r ) Yes  | Yes     |   99     | rpm-md | https://download.opensuse.org/update/leap/15.0/oss/                                         |
 8 | non-oss-addon-15.0-0                 | Depot officiel logiciels non libre (Non-OSS) | Yes     | (r ) Yes  | Yes     |   99     | rpm-md | https://download.opensuse.org/distribution/leap/15.0/repo/non-oss/                          |
 9 | openSUSE-Leap-15.0-1                 | openSUSE-Leap-15.0-1                         | Yes     | (r ) Yes  | Yes     |   99     | rpm-md | http://148.60.128.26/15.0/inst-source                                                       |
10 | openSUSE-Leap-15.0-1_0               | Depot officiel principal (OSS)               | Yes     | (r ) Yes  | Yes     |   99     | rpm-md | https://download.opensuse.org/distribution/leap/15.0/repo/oss/                              |
11 | science                              | science
4 

zypper se -si glibc
Loading repository data...
Reading installed packages...

S  | Name              | Type    | Version            | Arch   | Repository
---+-------------------+---------+--------------------+--------+-------------------------------
i+ | glibc             | package | 2.26-lp150.11.17.1 | x86_64 | OSS Updates
i  | glibc-32bit       | package | 2.26-lp150.11.17.1 | x86_64 | OSS Updates
i  | glibc-devel       | package | 2.26-lp150.11.17.1 | x86_64 | OSS Updates
i  | glibc-devel-32bit | package | 2.26-lp150.11.17.1 | x86_64 | OSS Updates
i  | glibc-extra       | package | 2.26-lp150.11.17.1 | x86_64 | OSS Updates
i  | glibc-info        | package | 2.26-lp150.11.17.1 | noarch | OSS Updates
i  | glibc-locale      | package | 2.26-lp150.11.17.1 | x86_64 | OSS Updates
i  | glibc-locale-base | package | 2.26-lp150.11.17.1 | x86_64 | OSS Updates
i  | linux-glibc-devel | package | 4.15-lp150.1.23    | noarch | Depot officiel principal (OSS)
5

I did a fresh install before these last command.

and zypper in qgis worked :slight_smile: but …


Terminate called after throwing an instance of 'H5:ataSpaceIException'
Abandon (core dumped)

:\

6

I guess the hdf5 library is making trouble …

For information :


zypper se -si hdf5
Loading repository data...
Reading installed packages...

S  | Name                         | Type    | Version            | Arch   | Repository
---+------------------------------+---------+--------------------+--------+-------------------------------
i  | hdf5                         | package | 1.10.4-lp150.134.1 | x86_64 | science
i+ | hdf5-devel                   | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | hdf5-devel-data              | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | hdf5-openmpi                 | package | 1.10.4-lp150.134.1 | x86_64 | science
i+ | hdf5-openmpi-devel           | package | 1.10.4-lp150.134.1 | x86_64 | science
i+ | libhdf5-101                  | package | 1.10.1-lp150.6.4   | x86_64 | openSUSE-Leap-15.0-1
i+ | libhdf5-101                  | package | 1.10.1-lp150.6.4   | x86_64 | Depot officiel principal (OSS)
i+ | libhdf5-101-openmpi          | package | 1.10.1-lp150.6.5   | x86_64 | Depot officiel principal (OSS)
i  | libhdf5-103                  | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | libhdf5-103-openmpi          | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | libhdf5_cpp101               | package | 1.10.1-lp150.6.4   | x86_64 | Depot officiel principal (OSS)
i  | libhdf5_cpp103               | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | libhdf5_cpp103-openmpi       | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | libhdf5_fortran100           | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | libhdf5_fortran100-openmpi   | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | libhdf5_hl100                | package | 1.10.4-lp150.134.1 | x86_64 | science
i+ | libhdf5_hl100-openmpi        | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | libhdf5_hl_cpp100            | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | libhdf5_hl_cpp100-openmpi    | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | libhdf5hl_fortran100         | package | 1.10.4-lp150.134.1 | x86_64 | science
i  | libhdf5hl_fortran100-openmpi | package | 1.10.4-lp150.134.1 | x86_64 | science
7

I also opened an issue int the github of Qgis :
https://github.com/qgis/QGIS/issues/30821

8

First, an Internet search on ataSpaceIException turned up nothing but some hits when the “i” was replaced with a space…

I’d expect this kind of error wouldn’t be thrown until you actually tried to read some data…
You might try another dataset on the chance the one that threw the exception might be corrupted.

TSU