With snapshot 20250610 which includes Mesa 25.1.3-417.1 native GTK4 Gnome apps like Nautilus, Console, System Monitor etc. show a blank window on Wayland session.
That might be limited to Intel Haswell graphics (which has a known incomplete Vulkan implementation) and possibly older GPUs.
Available workarounds:
use an Xorg session if you still have one (the Vulkan renderer is the default only for the Wayland session);
write GSK_RENDERER=nglto /etc/environment (create that file if you have not one);
for temporary debugging use e.g. the old gnome-terminal or XTerm and issue for instance GSK_RENDERER=ngl nautilus (or the name of the GTK4 app you need).
I have a nvidia 750ti and gnome-system-monitor works fine … I don’t have the gnome-desktop pattern installed so I only have what’s been pulled by dependencies (no nautilus/console)
If you are lucky, you have hybrid graphics and one of your GPUs has a better support for Vulkan, you can force the use of that GPU.
For instance on this system: