Hello, has anyone sucessfully installed rNOMADS in R studio inside of TUMBLEWEED?
> install.packages("rNOMADS")
Installing package into ‘/home/agbeli/R/x86_64-suse-linux-gnu-library/3.4’
(as ‘lib’ is unspecified)
also installing the dependencies ‘curl’, ‘dotCall64’, ‘httr’, ‘spam’, ‘splancs’, ‘rvest’, ‘fields’, ‘GEOmap’
trying URL 'https://cran.rstudio.com/src/contrib/curl_3.1.tar.gz'
Content type 'application/x-gzip' length 366086 bytes (357 KB)
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downloaded 357 KB
trying URL 'https://cran.rstudio.com/src/contrib/dotCall64_0.9-5.tar.gz'
Content type 'application/x-gzip' length 17097 bytes (16 KB)
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downloaded 16 KB
trying URL 'https://cran.rstudio.com/src/contrib/httr_1.3.1.tar.gz'
Content type 'application/x-gzip' length 147593 bytes (144 KB)
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downloaded 144 KB
trying URL 'https://cran.rstudio.com/src/contrib/spam_2.1-2.tar.gz'
Content type 'application/x-gzip' length 1323898 bytes (1.3 MB)
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downloaded 1.3 MB
trying URL 'https://cran.rstudio.com/src/contrib/splancs_2.01-40.tar.gz'
Content type 'application/x-gzip' length 105583 bytes (103 KB)
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downloaded 103 KB
trying URL 'https://cran.rstudio.com/src/contrib/rvest_0.3.2.tar.gz'
Content type 'application/x-gzip' length 1597137 bytes (1.5 MB)
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downloaded 1.5 MB
trying URL 'https://cran.rstudio.com/src/contrib/fields_9.0.tar.gz'
Content type 'application/x-gzip' length 3264975 bytes (3.1 MB)
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downloaded 3.1 MB
trying URL 'https://cran.rstudio.com/src/contrib/GEOmap_2.4-0.tar.gz'
Content type 'application/x-gzip' length 2473528 bytes (2.4 MB)
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downloaded 2.4 MB
trying URL 'https://cran.rstudio.com/src/contrib/rNOMADS_2.3.8.tar.gz'
Content type 'application/x-gzip' length 41804 bytes (40 KB)
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downloaded 40 KB
* installing *source* package ‘curl’ ...
** package ‘curl’ successfully unpacked and MD5 sums checked
Package libcurl was not found in the pkg-config search path.
Perhaps you should add the directory containing `libcurl.pc'
to the PKG_CONFIG_PATH environment variable
No package 'libcurl' found
Package libcurl was not found in the pkg-config search path.
Perhaps you should add the directory containing `libcurl.pc'
to the PKG_CONFIG_PATH environment variable
No package 'libcurl' found
Using PKG_CFLAGS=
Using PKG_LIBS=-lcurl
------------------------- ANTICONF ERROR ---------------------------
Configuration failed because libcurl was not found. Try installing:
* deb: libcurl4-openssl-dev (Debian, Ubuntu, etc)
* rpm: libcurl-devel (Fedora, CentOS, RHEL)
* csw: libcurl_dev (Solaris)
If libcurl is already installed, check that 'pkg-config' is in your
PATH and PKG_CONFIG_PATH contains a libcurl.pc file. If pkg-config
is unavailable you can set INCLUDE_DIR and LIB_DIR manually via:
R CMD INSTALL --configure-vars='INCLUDE_DIR=... LIB_DIR=...'
--------------------------------------------------------------------
ERROR: configuration failed for package ‘curl’
* removing ‘/home/agbeli/R/x86_64-suse-linux-gnu-library/3.4/curl’
Warning in install.packages :
installation of package ‘curl’ had non-zero exit status
* installing *source* package ‘dotCall64’ ...
** package ‘dotCall64’ successfully unpacked and MD5 sums checked
** libs
gcc -I/usr/lib64/R/include -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -DDOTCAL64_PRIVATE -fpic -fmessage-length=0 -grecord-gcc-switches -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -c dotCall64.c -o dotCall64.o
gcc -I/usr/lib64/R/include -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -DDOTCAL64_PRIVATE -fpic -fmessage-length=0 -grecord-gcc-switches -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -c dotCall64helpers.c -o dotCall64helpers.o
gcc -I/usr/lib64/R/include -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -DDOTCAL64_PRIVATE -fpic -fmessage-length=0 -grecord-gcc-switches -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -c init.c -o init.o
gcc -I/usr/lib64/R/include -DNDEBUG -I/usr/local/include -fopenmp -I../inst/include/ -DDOTCAL64_PRIVATE -fpic -fmessage-length=0 -grecord-gcc-switches -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -c testfunctions_c.c -o testfunctions_c.o
gfortran -fpic -fmessage-length=0 -grecord-gcc-switches -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -c testfunctions_f.f -o testfunctions_f.o
make: gfortran: Command not found
make: *** [/usr/lib64/R/etc/Makeconf:182: testfunctions_f.o] Error 127
ERROR: compilation failed for package ‘dotCall64’
* removing ‘/home/agbeli/R/x86_64-suse-linux-gnu-library/3.4/dotCall64’
Warning in install.packages :
installation of package ‘dotCall64’ had non-zero exit status
* installing *source* package ‘splancs’ ...
** package ‘splancs’ successfully unpacked and MD5 sums checked
** libs
gfortran -fpic -fmessage-length=0 -grecord-gcc-switches -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector-strong -funwind-tables -fasynchronous-unwind-tables -fstack-clash-protection -c areapl.f -o areapl.o
make: gfortran: Command not found
make: *** [/usr/lib64/R/etc/Makeconf:182: areapl.o] Error 127
ERROR: compilation failed for package ‘splancs’
* removing ‘/home/agbeli/R/x86_64-suse-linux-gnu-library/3.4/splancs’
Warning in install.packages :
installation of package ‘splancs’ had non-zero exit status
ERROR: dependency ‘curl’ is not available for package ‘httr’
* removing ‘/home/agbeli/R/x86_64-suse-linux-gnu-library/3.4/httr’
Warning in install.packages :
installation of package ‘httr’ had non-zero exit status
ERROR: dependency ‘dotCall64’ is not available for package ‘spam’
* removing ‘/home/agbeli/R/x86_64-suse-linux-gnu-library/3.4/spam’
Warning in install.packages :
installation of package ‘spam’ had non-zero exit status
ERROR: dependency ‘httr’ is not available for package ‘rvest’
* removing ‘/home/agbeli/R/x86_64-suse-linux-gnu-library/3.4/rvest’
Warning in install.packages :
installation of package ‘rvest’ had non-zero exit status
ERROR: dependency ‘spam’ is not available for package ‘fields’
* removing ‘/home/agbeli/R/x86_64-suse-linux-gnu-library/3.4/fields’
Warning in install.packages :
installation of package ‘fields’ had non-zero exit status
ERROR: dependencies ‘splancs’, ‘fields’ are not available for package ‘GEOmap’
* removing ‘/home/agbeli/R/x86_64-suse-linux-gnu-library/3.4/GEOmap’
Warning in install.packages :
installation of package ‘GEOmap’ had non-zero exit status
ERROR: dependencies ‘rvest’, ‘fields’, ‘GEOmap’ are not available for package ‘rNOMADS’
* removing ‘/home/agbeli/R/x86_64-suse-linux-gnu-library/3.4/rNOMADS’
Warning in install.packages :
installation of package ‘rNOMADS’ had non-zero exit status
The downloaded source packages are in
‘/tmp/Rtmp8DsjZt/downloaded_packages’
> library(rNOMADS)
Error in library(rNOMADS) : there is no package called ‘rNOMADS’
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