systemd-resolved dnsOverTls setup bypassed by all flatpak and discover and many system component

i have setup a dns with systend-resolve but flatpak apps discover and many system component are not using that dns it skips that my personal dns how to fix this
i was using fedora 34-37 workstation and kde but never find this error can anyone have a ans.
i am using nextdns. and flatpak and snap apps always use systemd -resolved dns i have never seen any issues so far need some look into.