Still with Unison? Have you actually tried it yet? Probably not, I think, because if you open the profile and scan, and check the menu, it should clearly explain itself to you.
When you run the scan (it runs when you open the profile), it lists whether files have changed and which side they were changed on, if there are new files on one side or the other they are listed, and if a file is deleted on one side or the other. You scan that list before applying the actions. If you apply without changing anything, the two sides will be synchronized (ie: new files will now be on both sides, changed files will now both be the latest version on both sides, and files deleted on one side will be deleted on the other): Complete Synchronization.
You can make decisions on individual files. If you want a file deleted on one side, but not the other, you can mark that file to be permanently ignored when synchronizing.
If you decide you want the older version instead of the changed one, you can reverse the arrow (which shows the direction the synch will be performed) on an individual file.
If it is a new file, but you do not want it (say, a junk file), you can reverse the arrow so it is deleted on both sides instead of copied to both sides.
If you want to keep the new file on one side, but not on the other, you can – again – decide to permanently ignore that file. The dialogue says “permanently ignore this path”, and since the full path is to that unique file, it is that file only. Do not get confused thinking that means the entire directory. Other files in the same directory will still be synchronized, unless you decide to permanently ignore them individually, or unless you decide to ignore the Folder instead of the files.
All quite straightforward.
Run it, let it scan, then check the list and check the options in the menu. If you are unsure, or change your mind about synchronizing before you hit the “Apply” button, nothing will be changed and you can just exit. And, nothing will change … until you hit the Apply button.
It is actually very straightforward, and self-explanatory.