Mouse keyboard on Laptop + USB inputs frozen

Hello,

I recently installed Tumbleweed over my previous Manjaro installation, and are running in to an issue where every now and again my mouse and keyboard will freeze and I am unable to access any of these peripheral devices. Further I’ve tried connecting my usb mouse in all usb sockets and had no luck getting movement frm my mouse

Any help greatly appreciated

inxi -Fazy
System:
  Kernel: 6.4.11-1-default arch: x86_64 bits: 64 compiler: gcc v: 13.2.1
    parameters: BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default
    root=/dev/mapper/system-root splash=silent resume=/dev/system/swap0
    mitigations=auto quiet security=apparmor nosimplefb=1
  Desktop: KDE Plasma v: 5.27.7 tk: Qt v: 5.15.10 wm: kwin_x11 vt: 2 dm: SDDM
    Distro: openSUSE Tumbleweed 20230828
Machine:
  Type: Laptop System: Metabox product: PC50DC v: N/A
    serial: <superuser required> Chassis: IT Channel Pty Ltd type: 10
    serial: <superuser required>
  Mobo: IT Channel Pty model: PCX0DX serial: <superuser required>
    UEFI: INSYDE v: 1.07.08TMB date: 06/17/2020
Battery:
  ID-1: BAT0 charge: 54.9 Wh (100.0%) condition: 54.9/70.7 Wh (77.6%)
    volts: 12.9 min: 11.4 model: Notebook BAT type: Li-ion serial: <filter>
    status: full
CPU:
  Info: model: Intel Core i7-10875H bits: 64 type: MT MCP arch: Comet Lake
    gen: core 10 level: v3 note: check built: 2020 process: Intel 14nm family: 6
    model-id: 0xA5 (165) stepping: 2 microcode: 0xF8
  Topology: cpus: 1x cores: 8 tpc: 2 threads: 16 smt: enabled cache:
    L1: 512 KiB desc: d-8x32 KiB; i-8x32 KiB L2: 2 MiB desc: 8x256 KiB L3: 16 MiB
    desc: 1x16 MiB
  Speed (MHz): avg: 1369 high: 2300 min/max: 800/5100 scaling:
    driver: intel_pstate governor: powersave cores: 1: 2300 2: 2300 3: 2300
    4: 2300 5: 800 6: 800 7: 800 8: 800 9: 800 10: 800 11: 800 12: 913 13: 800
    14: 2300 15: 800 16: 2300 bogomips: 73625
  Flags: avx avx2 ht lm nx pae sse sse2 sse3 sse4_1 sse4_2 ssse3 vmx
  Vulnerabilities:
  Type: gather_data_sampling mitigation: Microcode
  Type: itlb_multihit status: KVM: VMX disabled
  Type: l1tf status: Not affected
  Type: mds status: Not affected
  Type: meltdown status: Not affected
  Type: mmio_stale_data mitigation: Clear CPU buffers; SMT vulnerable
  Type: retbleed mitigation: Enhanced IBRS
  Type: spec_rstack_overflow status: Not affected
  Type: spec_store_bypass mitigation: Speculative Store Bypass disabled via
    prctl
  Type: spectre_v1 mitigation: usercopy/swapgs barriers and __user pointer
    sanitization
  Type: spectre_v2 mitigation: Enhanced / Automatic IBRS, IBPB: conditional,
    RSB filling, PBRSB-eIBRS: SW sequence
  Type: srbds mitigation: Microcode
  Type: tsx_async_abort status: Not affected
Graphics:
  Device-1: Intel CometLake-H GT2 [UHD Graphics] vendor: CLEVO/KAPOK
    driver: i915 v: kernel arch: Gen-9.5 process: Intel 14nm built: 2016-20
    ports: active: eDP-1 empty: none bus-ID: 00:02.0 chip-ID: 8086:9bc4
    class-ID: 0300
  Device-2: NVIDIA TU116M [GeForce GTX 1660 Ti Mobile] vendor: CLEVO/KAPOK
    driver: nvidia v: 535.86.05 alternate: nouveau,nvidia_drm non-free: 530.xx+
    status: current (as of 2023-05) arch: Turing code: TUxxx
    process: TSMC 12nm FF built: 2018-22 pcie: gen: 3 speed: 8 GT/s lanes: 16
    ports: active: none empty: DP-1,DP-2,HDMI-A-1 bus-ID: 01:00.0
    chip-ID: 10de:2191 class-ID: 0300
  Device-3: Bison BisonCam NB Pro driver: uvcvideo type: USB rev: 2.0
    speed: 480 Mb/s lanes: 1 mode: 2.0 bus-ID: 1-8:4 chip-ID: 5986:9102
    class-ID: 0e02
  Display: x11 server: X.Org v: 21.1.8 with: Xwayland v: 23.1.2
    compositor: kwin_x11 driver: X: loaded: modesetting,nvidia alternate: intel
    dri: iris gpu: i915 display-ID: :0 screens: 1
  Screen-1: 0 s-res: 1920x1080 s-dpi: 96 s-size: 507x285mm (19.96x11.22")
    s-diag: 582mm (22.9")
  Monitor-1: eDP-1 mapped: eDP-1-1 model: Najing CEC Panda 0x004d built: 2019
    res: 1920x1080 hz: 144 dpi: 142 gamma: 1.2 size: 344x194mm (13.54x7.64")
    diag: 395mm (15.5") ratio: 16:9 modes: 1920x1080
  API: OpenGL v: 4.6.0 NVIDIA 535.86.05 renderer: NVIDIA GeForce GTX 1660
    Ti/PCIe/SSE2 direct-render: Yes
Audio:
  Device-1: Intel Comet Lake PCH cAVS vendor: CLEVO/KAPOK driver: snd_hda_intel
    v: kernel alternate: snd_soc_skl,snd_sof_pci_intel_cnl bus-ID: 00:1f.3
    chip-ID: 8086:06c8 class-ID: 0403
  API: ALSA v: k6.4.11-1-default status: kernel-api with: aoss
    type: oss-emulator tools: alsactl,alsamixer,amixer
  Server-1: PipeWire v: 0.3.77 status: active with: 1: pipewire-pulse
    status: active 2: wireplumber status: active 3: pipewire-alsa type: plugin
    4: pw-jack type: plugin tools: pactl,pw-cat,pw-cli,wpctl
Network:
  Device-1: Intel Comet Lake PCH CNVi WiFi driver: iwlwifi v: kernel
    bus-ID: 00:14.3 chip-ID: 8086:06f0 class-ID: 0280
  IF: wlp0s20f3 state: up mac: <filter>
  Device-2: Realtek RTL8111/8168/8411 PCI Express Gigabit Ethernet
    vendor: CLEVO/KAPOK driver: r8169 v: kernel pcie: gen: 1 speed: 2.5 GT/s
    lanes: 1 port: 3000 bus-ID: 46:00.0 chip-ID: 10ec:8168 class-ID: 0200
  IF: enp70s0 state: down mac: <filter>
Bluetooth:
  Device-1: Intel AX201 Bluetooth driver: btusb v: 0.8 type: USB rev: 2.0
    speed: 12 Mb/s lanes: 1 mode: 1.1 bus-ID: 1-14:6 chip-ID: 8087:0026
    class-ID: e001
  Report: rfkill ID: hci0 rfk-id: 1 state: down bt-service: enabled,running
    rfk-block: hardware: no software: yes address: see --recommends
Drives:
  Local Storage: total: 931.51 GiB used: 11.71 GiB (1.3%)
  SMART Message: Unable to run smartctl. Root privileges required.
  ID-1: /dev/nvme0n1 maj-min: 259:0 vendor: Western Digital
    model: WDS100T2B0C-00PXH0 size: 931.51 GiB block-size: physical: 512 B
    logical: 512 B speed: 31.6 Gb/s lanes: 4 tech: SSD serial: <filter>
    fw-rev: 211070WD temp: 35.9 C scheme: GPT
Partition:
  ID-1: / raw-size: 838.78 GiB size: 838.78 GiB (100.00%)
    used: 11.71 GiB (1.4%) fs: btrfs dev: /dev/dm-1 maj-min: 254:1
    mapped: system-root
  ID-2: /boot/efi raw-size: 512 MiB size: 511 MiB (99.80%)
    used: 792 KiB (0.2%) fs: vfat dev: /dev/nvme0n1p1 maj-min: 259:1
  ID-3: /home raw-size: 838.78 GiB size: 838.78 GiB (100.00%)
    used: 11.71 GiB (1.4%) fs: btrfs dev: /dev/dm-1 maj-min: 254:1
    mapped: system-root
  ID-4: /opt raw-size: 838.78 GiB size: 838.78 GiB (100.00%)
    used: 11.71 GiB (1.4%) fs: btrfs dev: /dev/dm-1 maj-min: 254:1
    mapped: system-root
  ID-5: /var raw-size: 838.78 GiB size: 838.78 GiB (100.00%)
    used: 11.71 GiB (1.4%) fs: btrfs dev: /dev/dm-1 maj-min: 254:1
    mapped: system-root
Swap:
  Kernel: swappiness: 60 (default) cache-pressure: 100 (default)
  ID-1: swap-1 type: partition size: 15.3 GiB used: 0 KiB (0.0%) priority: -2
    dev: /dev/dm-2 maj-min: 254:2 mapped: system-swap0
Sensors:
  System Temperatures: cpu: 55.0 C pch: 67.0 C mobo: N/A gpu: nvidia temp: 55 C
  Fan Speeds (RPM): N/A
Info:
  Processes: 361 Uptime: 0h 8m wakeups: 1538 Memory: available: 15.3 GiB
  used: 2.48 GiB (16.2%) Init: systemd v: 253 default: graphical
  tool: systemctl Compilers: gcc: 13.2.1 alt: 13 Packages: pm: rpm pkgs: N/A
  note: see --rpm tools: yast,zypper pm: flatpak pkgs: 0 Shell: Bash v: 5.2.15
  running-in: konsole inxi: 3.3.27

I’m not sure if this has anything to do with it but I’ve noticed a psmouse error on shutdown popping up:

sudo journalctl -b -1 | grep psmouse
Sep 01 13:19:25 localhost kernel: psmouse serio1: synaptics: queried max coordinates: x [..5662], y [..4730]
Sep 01 13:19:25 localhost kernel: psmouse serio1: synaptics: queried min coordinates: x [1278..], y [1122..]
Sep 01 13:19:25 localhost kernel: psmouse serio1: synaptics: Your touchpad () says it can support a different bus. If i2c-hid and hid-rmi are not used, you might want to try setting psmouse.synaptics_intertouch to 1 and report this to linux-input@vger.kernel.org.
Sep 01 13:19:25 localhost kernel: psmouse serio1: synaptics: Touchpad model: 1, fw: 9.32, id: 0x1e2a1, caps: 0xf00223/0x840300/0x2e800/0x500000, board id: 3449, fw id: 2864695

Was everything working nicely on Manjaro? Can you share the lsusb output for these devices?

Did you try:


If i2c-hid and hid-rmi are not used, you might want to try setting psmouse.synaptics_intertouch to 1

When a hang occurs, does unplugging and replugging help?

My laptop seems to be using i2c-hid so I set the parameter to “0” after seeing someone else recomend this method.

Though not sure on the output from that

sudo journalctl -b -1 | grep psmouse
Sep 01 20:02:17 localhost kernel: Command line: BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=0 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1
Sep 01 20:02:17 localhost kernel: Kernel command line: BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=0 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1
Sep 01 20:02:17 localhost kernel: psmouse serio1: synaptics: queried max coordinates: x [..5662], y [..4730]
Sep 01 20:02:17 localhost kernel: psmouse serio1: synaptics: queried min coordinates: x [1278..], y [1122..]
Sep 01 20:02:17 localhost kernel: psmouse serio1: synaptics: Touchpad model: 1, fw: 9.32, id: 0x1e2a1, caps: 0xf00223/0x840300/0x2e800/0x500000, board id: 3449, fw id: 2864695
Sep 01 20:02:17 localhost dracut-cmdline[318]: Using kernel command line parameters:  rd.driver.pre=btrfs rd.luks.uuid=luks-593c2f76-4b01-4800-a13b-19b84ba1144f rd.lvm.lv=system/root   rd.lvm.lv=system/swap0 resume=UUID=cfd0ce5d-8819-47e1-8443-3954e27118ff root=UUID=1f823239-9d66-4867-85b5-172288e90526 rootfstype=btrfs rootflags=rw,relatime,ssd,space_cache=v2,subvolid=266,subvol=/@/.snapshots/1/snapshot,subvol=@/.snapshots/1/snapshot   BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=0 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1
Sep 01 20:02:18 localhost plymouthd[577]: 00:00:02.796 ply-utils.c:959:ply_get_kernel_command_line                   : Kernel command line is: 'BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=0 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1
Sep 01 20:02:23 localhost plymouthd[1179]: 00:00:07.369 ply-utils.c:959:ply_get_kernel_command_line                   : Kernel command line is: 'BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=0 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1
Sep 01 20:05:08 9ZGMEK plymouthd[4620]: 00:02:52.263 ply-utils.c:959:ply_get_kernel_command_line                   : Kernel command line is: 'BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=0 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1

I’ve had this freeze occur again, I’m trying with the parameter set to 1 but am still unsure on what is causing the system freezes

Output with paranter set to 1

Sep 02 20:54:07 localhost kernel: Command line: BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=1 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1
Sep 02 20:54:07 localhost kernel: Kernel command line: BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=1 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1
Sep 02 20:54:07 localhost kernel: psmouse serio1: synaptics: queried max coordinates: x [..5662], y [..4730]
Sep 02 20:54:07 localhost kernel: psmouse serio1: synaptics: queried min coordinates: x [1278..], y [1122..]
Sep 02 20:54:07 localhost kernel: psmouse serio1: synaptics: Trying to set up SMBus access
Sep 02 20:54:07 localhost kernel: psmouse serio1: synaptics: SMbus companion is not ready yet
Sep 02 20:54:07 localhost kernel: psmouse serio1: synaptics: Touchpad model: 1, fw: 9.32, id: 0x1e2a1, caps: 0xf00223/0x840300/0x2e800/0x500000, board id: 3449, fw id: 2864695
Sep 02 20:54:07 localhost dracut-cmdline[323]: Using kernel command line parameters:  rd.driver.pre=btrfs rd.luks.uuid=luks-593c2f76-4b01-4800-a13b-19b84ba1144f rd.lvm.lv=system/root   rd.lvm.lv=system/swap0 resume=UUID=cfd0ce5d-8819-47e1-8443-3954e27118ff root=UUID=1f823239-9d66-4867-85b5-172288e90526 rootfstype=btrfs rootflags=rw,relatime,ssd,space_cache=v2,subvolid=266,subvol=/@/.snapshots/1/snapshot,subvol=@/.snapshots/1/snapshot   BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=1 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1
Sep 02 20:54:08 localhost plymouthd[578]: 00:00:02.903 ply-utils.c:959:ply_get_kernel_command_line                   : Kernel command line is: 'BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=1 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1
Sep 02 20:54:13 localhost plymouthd[1179]: 00:00:07.317 ply-utils.c:959:ply_get_kernel_command_line                   : Kernel command line is: 'BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=1 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1
Sep 02 20:59:48 9ZGMEK plymouthd[6751]: 00:05:42.175 ply-utils.c:959:ply_get_kernel_command_line                   : Kernel command line is: 'BOOT_IMAGE=/boot/vmlinuz-6.4.11-1-default root=/dev/mapper/system-root psmouse.synaptics_intertouch=1 splash=silent resume=/dev/system/swap0 mitigations=auto quiet security=apparmor nosimplefb=1

Posting more outputs that could be the issue, but unsure, I notieced this in dmesg

[  253.313725] atkbd serio0: Unknown key pressed (translated set 2, code 0x6f on isa0060/serio0).
[  253.313732] atkbd serio0: Use 'setkeycodes 6f <keycode>' to make it known.
[  255.416623] atkbd serio0: Unknown key released (translated set 2, code 0x6f on isa0060/serio0).
[  255.416636] atkbd serio0: Use 'setkeycodes 6f <keycode>' to make it known.
[  324.633860] pcieport 0000:00:01.0: PME: Spurious native interrupt!
[  360.580382] pcieport 0000:00:01.0: PME: Spurious native interrupt!
[  426.019711] pcieport 0000:00:01.0: PME: Spurious native interrupt!
[  640.449485] BTRFS info (device dm-1): qgroup scan completed (inconsistency flag cleared)
[  649.006185] pcieport 0000:00:01.0: PME: Spurious native interrupt!
[  709.433231] pcieport 0000:00:01.0: PME: Spurious native interrupt!
[  732.019946] pcieport 0000:00:01.0: PME: Spurious native interrupt!

hey thanks for the reply:

lsusb:

Bus 006 Device 001: ID 1d6b:0003 Linux Foundation 3.0 root hub
Bus 005 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub
Bus 002 Device 001: ID 1d6b:0003 Linux Foundation 3.0 root hub
Bus 001 Device 003: ID 5986:9102 Bison Electronics Inc. BisonCam,NB Pro
Bus 001 Device 002: ID 048d:8910 Integrated Technology Express, Inc. ITE Device(829x)
Bus 001 Device 005: ID 8087:0026 Intel Corp. AX201 Bluetooth
Bus 001 Device 004: ID 06cb:00c7 Synaptics, Inc. TouchPad
Bus 001 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub

I had this occur once towards the end of my time with Manjaro but seems to be happening more frequently here and am having to completely restart the computer

What about:

When a hang occurs, does unplugging and replugging the USB devices help?

If it started occurring in Manjaro it could be some regression in Linux but also some hardware going bad over time.

Would be good to figure out what is connected to pcieport 0000:00:01.0 (try lspci) but I do not think it is the USB controller.

atkbd – the AT keyboard, I think this message is somehow triggered by Synaptics TouchPad but I am surprised that is handled by this atkbd driver.

I have this output

lsusb -t
/:  Bus 06.Port 1: Dev 1, Class=root_hub, Driver=xhci_hcd/2p, 10000M
/:  Bus 05.Port 1: Dev 1, Class=root_hub, Driver=xhci_hcd/2p, 480M
/:  Bus 02.Port 1: Dev 1, Class=root_hub, Driver=xhci_hcd/8p, 10000M
/:  Bus 01.Port 1: Dev 1, Class=root_hub, Driver=xhci_hcd/16p, 480M
    |__ Port 5: Dev 2, If 0, Class=Human Interface Device, Driver=usbhid, 12M
    |__ Port 8: Dev 3, If 0, Class=Video, Driver=uvcvideo, 480M
    |__ Port 8: Dev 3, If 1, Class=Video, Driver=uvcvideo, 480M
    |__ Port 10: Dev 4, If 0, Class=Vendor Specific Class, Driver=, 12M
    |__ Port 14: Dev 6, If 0, Class=Wireless, Driver=btusb, 12M
    |__ Port 14: Dev 6, If 1, Class=Wireless, Driver=btusb, 12M

Is ther another way to get a more direct read of whats on pcieport 0000:00:01.0?

Thank you

Does this add any sense to it?

[  292.080571] pcieport 0000:00:01.0: PME: Spurious native interrupt!
[  434.161667] pcieport 0000:00:01.0: PME: Spurious native interrupt!
[  446.108664] pcieport 0000:00:01.0: PME: Spurious native interrupt!
[  457.895612] pcieport 0000:00:01.0: PME: Spurious native interrupt!
___________
lspci -vv -t
-[0000:00]-+-00.0  Intel Corporation 10th Gen Core Processor Host Bridge/DRAM Registers
           +-01.0-[01-05]----00.0  NVIDIA Corporation TU116M [GeForce GTX 1660 Ti Mobile]
           +-02.0  Intel Corporation CometLake-H GT2 [UHD Graphics]
           +-04.0  Intel Corporation Xeon E3-1200 v5/E3-1500 v5/6th Gen Core Processor Thermal Subsystem
           +-12.0  Intel Corporation Comet Lake PCH Thermal Controller
           +-14.0  Intel Corporation Comet Lake USB 3.1 xHCI Host Controller
           +-14.2  Intel Corporation Comet Lake PCH Shared SRAM
           +-14.3  Intel Corporation Comet Lake PCH CNVi WiFi
           +-15.0  Intel Corporation Comet Lake PCH Serial IO I2C Controller #0
           +-15.1  Intel Corporation Comet Lake PCH Serial IO I2C Controller #1
           +-16.0  Intel Corporation Comet Lake HECI Controller
           +-17.0  Intel Corporation Device 06d3
           +-1b.0-[06-3f]----00.0-[07-3f]--+-00.0-[08]----00.0  Intel Corporation JHL7540 Thunderbolt 3 NHI [Titan Ridge 2C 2018]
           |                               +-01.0-[09-3e]--
           |                               \-02.0-[3f]----00.0  Intel Corporation JHL7540 Thunderbolt 3 USB Controller [Titan Ridge 2C 2018]
           +-1b.4-[40]----00.0  Sandisk Corp WD Blue SN550 NVMe SSD
           +-1d.0-[41-45]--
           +-1d.5-[46]----00.0  Realtek Semiconductor Co., Ltd. RTL8111/8168/8411 PCI Express Gigabit Ethernet Controller
           +-1d.6-[47]----00.0  Realtek Semiconductor Co., Ltd. RTS525A PCI Express Card Reader
           +-1d.7-[48]--
           +-1f.0  Intel Corporation Comet Lake LPC Controller
           +-1f.3  Intel Corporation Comet Lake PCH cAVS
           +-1f.4  Intel Corporation Comet Lake PCH SMBus Controller
           \-1f.5  Intel Corporation Comet Lake PCH SPI Controller

futher noticed something odd in dmesg, not too sure but the partitions look a bit off

[ 1078.441236] block nvme0n1: No UUID available providing old NGUID
[ 1078.527867] block nvme0n1: No UUID available providing old NGUID
[ 1078.991535] block nvme0n1: No UUID available providing old NGUID
[ 1079.085930] block nvme0n1: No UUID available providing old NGUID
[ 1079.189334] block nvme0n1: No UUID available providing old NGUID
[ 1079.284584] block nvme0n1: No UUID available providing old NGUID
[ 1079.776849] block nvme0n1: No UUID available providing old NGUID
[ 1079.867845] block nvme0n1: No UUID available providing old NGUID
[ 1096.814560] block nvme0n1: No UUID available providing old NGUID
[ 1096.885102] block nvme0n1: No UUID available providing old NGUID
[ 1097.251519] block nvme0n1: No UUID available providing old NGUID
[ 1097.326365] block nvme0n1: No UUID available providing old NGUID
[ 1097.409189] block nvme0n1: No UUID available providing old NGUID
[ 1097.489891] block nvme0n1: No UUID available providing old NGUID
[ 1097.904886] block nvme0n1: No UUID available providing old NGUID
[ 1097.990654] block nvme0n1: No UUID available providing old NGUID
[ 1189.228554] pcieport 0000:00:01.0: PME: Spurious native interrupt!
9ZGMEK:~> blkid
Absolute path to 'blkid' is '/usr/sbin/blkid', so running it may require superuser privileges (eg. root).
mothballz@9ZGMEK:~> sudo blkid
/dev/mapper/system-root: UUID="1f823239-9d66-4867-85b5-172288e90526" UUID_SUB="6e4f5665-3075-49c3-aaf4-3242bec9475d" BLOCK_SIZE="4096" TYPE="btrfs"
/dev/mapper/cr-auto-1: UUID="0TAxSV-AcvS-nFXQ-5Cxf-VJOU-FWNU-A1coap" TYPE="LVM2_member"
/dev/nvme0n1p4: UUID="593c2f76-4b01-4800-a13b-19b84ba1144f" TYPE="crypto_LUKS" PARTUUID="d4fdee51-93e0-4d0c-a58f-977927e5d9af"
/dev/nvme0n1p1: UUID="F6F7-C7CE" BLOCK_SIZE="512" TYPE="vfat" PARTUUID="12961536-ebe8-4e48-b6fd-2d1eae2cf7c7"
/dev/mapper/system-swap0: UUID="cfd0ce5d-8819-47e1-8443-3954e27118ff" TYPE="swap"
/dev/nvme0n1p2: UUID="a0abad5f-02e9-4a00-8c9d-dfd2e54ae183" TYPE="swap" PARTUUID="2588f1ab-41fe-2847-a19e-9bcb502ac0b8"
/dev/mapper/system-swap: UUID="e6943ce0-3157-439a-91ee-50c046b59834" TYPE="swap"

You lspci output indicates the “PME: Spurious native interrupt!” seems to originate from your NVIDIA video card, the NVME

Your nvme messages show something is not 100% as expected wfor your nvme, quite sure it is not related to your USB problems.

I did some digging on the “PME: Spurious native interrupt!” it looks to have been Optimus manager causing an issue, so I’ve removed it and so far haven’t seen that message pop up