Getting errors with system

I get this error when I run gedit as root in terminal.

GConf Error: Failed to contact configuration server; some possible causes are that you need to enable TCP/IP networking for ORBit, or you have stale NFS locks due to a system crash. See GConf configuration system for information. (Details - 1: Failed to get connection to session: Did not receive a reply. Possible causes include: the remote application did not send a reply, the message bus security policy blocked the reply, the reply timeout expired, or the network connection was broken.)

So I looked around and found something about running a system check. Well I really couldn’t find to much but I did find the command fsck and running it with the -n option this is what I got.

fsck -n

fsck from util-linux-ng 2.16
e2fsck 1.41.9 (22-Aug-2009)
Warning! /dev/sda8 is mounted.
Warning: skipping journal recovery because doing a read-only filesystem check.
/dev/sda8 contains a file system with errors, check forced.
Pass 1: Checking inodes, blocks, and sizes
Inodes that were part of a corrupted orphan linked list found. Fix? no

Inode 29778 was part of the orphaned inode list. IGNORED.
Inode 31995 was part of the orphaned inode list. IGNORED.
Inode 32366 was part of the orphaned inode list. IGNORED.
Inode 36097 was part of the orphaned inode list. IGNORED.
Inode 48258 was part of the orphaned inode list. IGNORED.
Inode 49003 was part of the orphaned inode list. IGNORED.
Inode 57025 was part of the orphaned inode list. IGNORED.
Inode 60878 was part of the orphaned inode list. IGNORED.
Inode 60880 was part of the orphaned inode list. IGNORED.
Inode 60904 was part of the orphaned inode list. IGNORED.
Inode 60921 was part of the orphaned inode list. IGNORED.
Inode 60925 was part of the orphaned inode list. IGNORED.
Inode 60931 was part of the orphaned inode list. IGNORED.
Inode 60958 was part of the orphaned inode list. IGNORED.
Inode 60960 was part of the orphaned inode list. IGNORED.
Inode 60962 was part of the orphaned inode list. IGNORED.
Inode 72697 was part of the orphaned inode list. IGNORED.
Inode 73433 was part of the orphaned inode list. IGNORED.
Inode 73435 was part of the orphaned inode list. IGNORED.
Inode 82220 was part of the orphaned inode list. IGNORED.
Inode 125496 was part of the orphaned inode list. IGNORED.
Inode 131600 was part of the orphaned inode list. IGNORED.
Inode 134011 was part of the orphaned inode list. IGNORED.
Inode 135357 was part of the orphaned inode list. IGNORED.
Inode 137323 was part of the orphaned inode list. IGNORED.
Inode 137325 was part of the orphaned inode list. IGNORED.
Inode 137328 was part of the orphaned inode list. IGNORED.
Inode 137353 was part of the orphaned inode list. IGNORED.
Inode 137359 was part of the orphaned inode list. IGNORED.
Inode 137360 was part of the orphaned inode list. IGNORED.
Inode 137858 was part of the orphaned inode list. IGNORED.
Inode 137859 was part of the orphaned inode list. IGNORED.
Inode 137860 was part of the orphaned inode list. IGNORED.
Inode 137866 was part of the orphaned inode list. IGNORED.
Inode 138014 was part of the orphaned inode list. IGNORED.
Inode 178199 was part of the orphaned inode list. IGNORED.
Inode 178201 was part of the orphaned inode list. IGNORED.
Inode 178202 was part of the orphaned inode list. IGNORED.
Inode 178209 was part of the orphaned inode list. IGNORED.
Inode 178210 was part of the orphaned inode list. IGNORED.
Inode 178212 was part of the orphaned inode list. IGNORED.
Inode 178213 was part of the orphaned inode list. IGNORED.
Inode 178214 was part of the orphaned inode list. IGNORED.
Inode 178219 was part of the orphaned inode list. IGNORED.
Inode 178225 was part of the orphaned inode list. IGNORED.
Inode 178244 was part of the orphaned inode list. IGNORED.
Inode 178248 was part of the orphaned inode list. IGNORED.
Inode 180785 was part of the orphaned inode list. IGNORED.
Inode 180789 was part of the orphaned inode list. IGNORED.
Inode 181035 was part of the orphaned inode list. IGNORED.
Inode 181036 was part of the orphaned inode list. IGNORED.
Inode 181037 was part of the orphaned inode list. IGNORED.
Inode 181040 was part of the orphaned inode list. IGNORED.
Inode 181044 was part of the orphaned inode list. IGNORED.
Inode 181046 was part of the orphaned inode list. IGNORED.
Inode 268648 was part of the orphaned inode list. IGNORED.
Inode 268677 was part of the orphaned inode list. IGNORED.
Inode 268680 was part of the orphaned inode list. IGNORED.
Inode 268682 was part of the orphaned inode list. IGNORED.
Inode 268690 was part of the orphaned inode list. IGNORED.
Inode 268693 was part of the orphaned inode list. IGNORED.
Inode 268698 was part of the orphaned inode list. IGNORED.
Inode 268702 was part of the orphaned inode list. IGNORED.
Inode 268703 was part of the orphaned inode list. IGNORED.
Inode 268704 was part of the orphaned inode list. IGNORED.
Inode 268705 was part of the orphaned inode list. IGNORED.
Inode 268706 was part of the orphaned inode list. IGNORED.
Inode 268707 was part of the orphaned inode list. IGNORED.
Inode 268708 was part of the orphaned inode list. IGNORED.
Inode 268709 was part of the orphaned inode list. IGNORED.
Inode 268710 was part of the orphaned inode list. IGNORED.
Inode 268711 was part of the orphaned inode list. IGNORED.
Inode 268712 was part of the orphaned inode list. IGNORED.
Inode 268713 was part of the orphaned inode list. IGNORED.
Inode 268714 was part of the orphaned inode list. IGNORED.
Inode 268716 was part of the orphaned inode list. IGNORED.
Inode 268717 was part of the orphaned inode list. IGNORED.
Inode 268721 was part of the orphaned inode list. IGNORED.
Inode 268722 was part of the orphaned inode list. IGNORED.
Inode 268723 was part of the orphaned inode list. IGNORED.
Inode 268724 was part of the orphaned inode list. IGNORED.
Inode 268725 was part of the orphaned inode list. IGNORED.
Inode 268726 was part of the orphaned inode list. IGNORED.
Inode 268727 was part of the orphaned inode list. IGNORED.
Inode 268728 was part of the orphaned inode list. IGNORED.
Inode 268729 was part of the orphaned inode list. IGNORED.
Inode 268730 was part of the orphaned inode list. IGNORED.
Inode 268731 was part of the orphaned inode list. IGNORED.
Inode 268732 was part of the orphaned inode list. IGNORED.
Inode 268733 was part of the orphaned inode list. IGNORED.
Inode 268734 was part of the orphaned inode list. IGNORED.
Inode 268737 was part of the orphaned inode list. IGNORED.
Inode 268752 was part of the orphaned inode list. IGNORED.
Inode 268753 was part of the orphaned inode list. IGNORED.
Inode 268759 was part of the orphaned inode list. IGNORED.
Inode 268767 was part of the orphaned inode list. IGNORED.
Inode 268768 was part of the orphaned inode list. IGNORED.
Inode 268769 was part of the orphaned inode list. IGNORED.
Inode 268771 was part of the orphaned inode list. IGNORED.
Inode 268772 was part of the orphaned inode list. IGNORED.
Inode 268773 was part of the orphaned inode list. IGNORED.
Inode 268774 was part of the orphaned inode list. IGNORED.
Inode 268775 was part of the orphaned inode list. IGNORED.
Inode 268776 was part of the orphaned inode list. IGNORED.
Deleted inode 398666 has zero dtime. Fix? no

Inode 398708 was part of the orphaned inode list. IGNORED.
Inode 419328 was part of the orphaned inode list. IGNORED.
Inode 681272 was part of the orphaned inode list. IGNORED.
Inode 681275 was part of the orphaned inode list. IGNORED.
Inode 681277 was part of the orphaned inode list. IGNORED.
Inode 813211 was part of the orphaned inode list. IGNORED.
Inode 820175 was part of the orphaned inode list. IGNORED.
Inode 820176 was part of the orphaned inode list. IGNORED.
Inode 820177 was part of the orphaned inode list. IGNORED.
Inode 820178 was part of the orphaned inode list. IGNORED.
Inode 820182 was part of the orphaned inode list. IGNORED.
Pass 2: Checking directory structure
Pass 3: Checking directory connectivity
Pass 4: Checking reference counts
Pass 5: Checking group summary information
Block bitmap differences: -(52800–52815) -(116656–116662) -119036 -(135680–135693) -(141474–141480) -(143898–143909) -(211670–211681) -(235130–235149) -(238271–238289) -(269923–269952) -(331226–331268) -(460955–461020) -(493246–493316) -(557304–557308) -(557544–557548) -(561224–561227) -(590848–590854) -(689700–689746) -(920254–920353) -(1083826–1083830) -(1104640–1104655) -(1105456–1105463) -(1105516–1105519) -(1105576–1105579) -(1105588–1105595) -(1105604–1105611) -(1105624–1105627) -(1105664–1105667) -(1105684–1105687) -(1114618–1114662) -(1115740–1115743) -(1117521–1117526) -(1118624–1118637) -(1121512–1121535) -(1122112–1122142) -(1122315–1122321) -(1122590–1122598) -(1124259–1124278) -(1124690–1124707) -(1124751–1124765) -(1127182–1127309) -(1127319–1127359) -(1127380–1127403) -(1127751–1127770) -(1128176–1128225) -(1443679–1444003) -1606758 -(1726128–1726136) -(1961984–1962019) -(1964032–1964033) -(2343103–2344436) -2434560 -(2442240–2442258) -(2449408–2449858) -(2451456–2451468) -(2453504–2453736) -(2462380–2463753) -2505728 -2506752 -(2839552–2839585) -(2950645–2950908) -(2956859–2957037) -3281676 -(3348575–3348576) -3348578 -(3548160–3548168) -(3549184–3549332) -(3560448–3560467) -(3561472–3561744) -(3591075–3591077) -(3602268–3602349) -(3610848–3614228) -(3614720–3614956) -(3632128–3632139) -(3640638–3644027) -(3666580–3669993)
Fix? no

Free blocks count wrong for group #49 (140, counted=139).
Fix? no

Free blocks count wrong for group #52 (50, counted=41).
Fix? no

Free blocks count wrong (2409173, counted=2354912).
Fix? no

Inode bitmap differences: -29778 -31995 -32366 -36097 -48258 -49003 -57025 -60878 -60880 -60904 -60921 -60925 -60931 -60958 -60960 -60962 -72697 -73433 -73435 -82220 -125496 -131600 -134011 -135357 -137323 -137325 -137328 -137353 -(137359–137360) -(137858–137860) -137866 -138014 -178199 -(178201–178202) -(178209–178210) -(178212–178214) -178219 -178225 -178244 -178248 -180785 -180789 -(181035–181037) -181040 -181044 -181046 -268648 -268677 -268680 -268682 -268690 -268693 -268698 -(268702–268714) -(268716–268717) -(268721–268734) -268737 -(268752–268753) -268759 -(268767–268769) -(268771–268776) -398666 -398708 -419328 -681272 -681275 -681277 -813211 -(820175–820178) -820182
Fix? no

Free inodes count wrong for group #16 (23, counted=22).
Fix? no

Free inodes count wrong (874417, counted=874814).
Fix? no

/dev/sda8: ********** WARNING: Filesystem still has errors **********

/dev/sda8: 438863/1313280 files (0.1% non-contiguous), 2833707/5242880 blocks

Now if I run the command as just fsck this is what I get.

WARNING!!! Running e2fsck on a mounted filesystem may cause
SEVERE filesystem damage.

Do you really want to continue (y/n)? no

So I said no because i’m not real sure of what it will do.

As you can see I have some orphaned inodes and these are probley from a Yast2 crashing a couple of times on me getting lockup because a repo was down or not responding.

Can any one help me out.

Your error from the gedit does not point to any disk corruption.

Anyway, DO NOT RUN fschk on a mounted file system.

So how do I fix my problems?

Yea the error from gedit has something to do with NFS, I’m trying to find more information on this.